Vladimir Grebinskiy, Ph.D.


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tel: +1-609-655-5105 ext 24
or (888)-482-9800
e-mail: grebinsk@cgen.com

Compugen

Since 1999, I work in the research group at Compugen Inc, Jamesburg, NJ, USA. You can visit company's website at  www.cgen.com. The Compugen's ticker is CGEN, in case you want to read the latest news about the company :)

I work in the field of bioinformatics and over the time participated in several interesting projects including:

Publications

MSc and PhD thesis

  1. Master Thesis "Transformation of Proofs in Arithmetics with Random Substitution Rule". St. Petersburg State University, Russia, 1995 (in Russian) Evgeny Dantsin was my advisor in this work.
  2. Doctorate Thesis "Combinatorial Search: Weighing and Graph Reconstructions Problems and Their Applications." INRIA-Lorrain and CRIN, Nancy, France, 1998 (in French) Gregory Kucherov was my advisor.

Conference and Journal Publications

  1. Vladimir Grebinski, "On the power of additive combinatorial search model". In Proceedings of the Fourth Annual International Computing and Combinatorics Conference (COCOON'98), vol. 1449 of LNCS, pp 194-203. Springer, 1998.
  2. Vladimir Grebinski and Gregory Kucherov, "Reconstructing set partitions." In Tenth Annual ACM-SIAM Symposium on Discrete Algorithms (SODA'99),pp 915-916, 1999.

  3. V. Grebinski and G. Kucherov. "Reconstructing a hamiltonian cycle by querying the graph: Application to DNA physical mapping." Discrete Applied Mathematics, 88:147-165, 1998.

  4. V. Grebinski and G. Kucherov. "Optimal Reconstruction of Graphs under the Additive Model". Algorithmica (2000)28: 104-124.
     

  5. "Designing oligo libraries taking alternative splicing into account." A. Shoshan, V. Grebinskiy, A. Scolnicov, E. Fink, D. Lehavi and A. Wasserman. Proc. SPIE 4266, May 2001.
  6. H. Xie, A. Wasserman, Z. Levine, A. Novik, V. Grebinskiy, A. Shoshan and L. Mintz, "Large-Scale Protein Annotation through Gene Ontology." Genome Research, vol. 12:5 pp. 785-794, 2002.

  7. Hanqing Xie, Wei-yong Zhu, Alon Wasserman, Vladimir Grebinskiy, Andrew Olson, and Liat Mintz Computational Analysis of Alternative Splicing Using EST Tissue Information”, Genomics, Vol. 80, Number 3, September 2002