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- Bahawalpur Museum
- Bhambhore, Thatta. Archaeological Museum
- Bhit Shah, Hyderabad, Sind. (The Bhitshah Cultural Center includes a muesum and cultural center)
- Faisalabad. Agricultural Museum
- Harappa. Archaeological Museum
- Hyderabad. Fort Museum, Pucca Fort
- Hyderabad. Sind Provincial Museum
- Islamabad, Lok Virsa. National Museum of Folk and Traditional Heritage
- Islamabad. National Museum
- Karachi. National Museum of Pakistan
- Karachi. National History Museum
- Karachi. Quaid-i-Azam Birthplace Museum
- Lahore. Allama Iqbal Museum
- Lahore. Lahore Fort Museum
- Lahore. Central Museum
- Lahore. Faqir Khana Museum
- Lahore. Holy Museum of the Badshahi Masjid
- Lahore. Museum of Science and Technology
- Lahore. Zoological Museum
- Mardan. Guide's Mess, Museum and Cemetery
- Mohenjo-daro. Archaeological Museum
- Peshawar Museum á Rawalpindi. Army Museum
- Saidu Sharif. Archaeological Museum
- Sialkot. Library and Museum at Birthplace of Allama Iqbal
- Taxila. Archaeological Museum
- Umarkot. Archaeological Museum