Home Page of Shubhra Sankar Ray

Shubhra Sankar Ray
Research Associate
Biophysics Division
Saha Institute of Nuclear Physics
Kolkata -700108
Research Associate in the DBT funded project entitled “Structure Analysis, Generation and Role of RNA structures containing Non Watson-Crick Base Pairs”, Biophysics Division, Saha Institute of Nuclear Physics, under the guidance of Prof. Dhananjay Bhattacharya from 23rd July 2008. Continuing Research in Bioinformatics. Have been awarded the Doctor of Philosophy in Engineering from Jadavpur University in 2008. Ph.D. thesis title New Computational Methods for Gene Analysis from Microarray Data. My Ph.D. supervisors were Prof. Sankar K. Pal, and Dr. Sanghamitra Bandyopadhyay


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Education


Research Interests

  • Bioinformatics, Neural Networks, Genetic Algorithms and Data mining

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Journals                     

·        Shubhra Sankar Ray, Sanghamitra Bandyopadhyay and Sankar K. Pal, “Combining Multi-Source Information through Functional Annotation based Weighting: Gene Function Prediction in Yeast”, Accepted in IEEE Transactions on BioMedical Engineering, 2008.

·        Shubhra Sankar Ray, Sanghamitra Bandyopadhyay and Sankar K. Pal, “Gene Ordering in Partitive Clustering using Microarray Expressions”, Journal of Biosciences, vol. 32, no. 5, pp. 1019-1025, 2007 (Special Issue- Bioinformatics: From Molecules to Systems). pub med

·        Shubhra Sankar Ray, Sanghamitra Bandyopadhyay and Sankar K. Pal, “Dynamic Range Based Distance Measure for Microarray Expressions and A Fast Gene Ordering Algorithm”, IEEE Transactions on Systems, Man, and Cybernetics, Part-B, vol. 37, no. 3, pp. 742-749, 2007. pub med

·        Shubhra Sankar Ray, Sanghamitra Bandyopadhyay and Sankar K. Pal, “Genetic Operators for Combinatorial Optimization in TSP and Microarray Gene Ordering. ”, Applied Intelligence, vol. 26, no. 3, pp. 183-195, 2007.

·        Sankar K. Pal, Sanghamitra Bandyopadhyay and Shubhra Sankar Ray, “Evolutionary Computation in Bioinformatics: A Review”, IEEE Transactions on Systems, Man, and Cybernetics, Part-C, vol. 36, no. 5, pp. 601-615, 2006.

·        Shubhra Sankar Ray, Sanghamitra Bandyopadhyay, Pabitra Mitra and Sankar K. Pal, “Bioinformatics in Neurocomputing Framework”, IEE Proc. Circuits Devices & Systems, vol. 152, pp. 556-564, 2005. (and CODEC-04, pp. 94, January 1-3, 2004, Kolkata).

Book Chapters and Conference Papers

·        Shubhra Sankar Ray, Sanghamitra Bandyopadhyay and Sankar K. Pal, “New Distance Measure for Microarray Gene Expressions using Linear Dynamic Range of Photo Multiplier Tube ”, International Conference on Computing: Theory and Applications, IEEE Computer Soceity, pp. 337-341, March 5-7, 2007, Kolkata, India. Slides presented in the conference

·        Shubhra Sankar Ray, Sanghamitra Bandyopadhyay and Sankar K. Pal, “Gene Ordering in Partitive Clustering using Microarray Expressions”, International Conference on Bioinformatics, INCOB 2006, pp. 33, 18-20 December, New Delhi, 2006 {only abstract (no article) published for oral presentation}.

·        Shubhra Sankar Ray, Sanghamitra Bandyopadhyay, and Sankar K. Pal, “New Genetic Operators for Solving TSP: Application to Microarray Gene Ordering”, First International Conference, PReMI 2005, Lecture Notes in Computer Science, vol. 3776, pp. 617-622, 2005, Springer-Verlag, Berlin, 2005.

·        Shubhra Sankar Ray, Sanghamitra Bandyopadhyay, Pabitra Mitra, and Sankar K. Pal, “Neurocomputing for Certain Bioinformatics Tasks”, Monitoring, Security, and Rescue Techniques in Multi-Agent Systems, Proc. Int. Workshop MSRAS, pp. 439-454, 2004, Springer-Verlag, Berlin, 2005.

·        Shubhra Sankar Ray, Sanghamitra Bandyopadhyay and Sankar K. Pal, “New Operators of Genetic algorithms for Traveling Salesman Problem”, ICPR-04, vol. 2, pp. 497-500, 23-26 August 2004, Cambridge, UK

·        Shubhra Sankar Ray, Sanghamitra Bandyopadhyay, Pabitra Mitra and Sankar K. Pal, “Bioinformatics in Neurocomputing Framework”, CODEC-04, pp. 94, January 1-3, 2004, Kolkata, India


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Contact :

Shubhra Sankar Ray
Research Associate
shubhrasankar (at) yahoo.com
shubhra.ray (at) saha.ac.in
shubhra_r (at) isical.ac.in
Biophysics Division,
Saha Institute of Nuclear Physics,
Sector-I, Block-‘AF’, Bidhannagar
Kolkata, India
PIN - 700064.

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This page is last modified on January 07, 2009